Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015914425.1_cds_XP_016464415.1_57454
CDS Infomation

[gene=LOC107787373] [db_xref=GeneID:107787373] [protein=CSC1-like protein ERD4 isoform X2] [protein_id=XP_016464415.1] [location=complement(join(13247..13627,15914..16169,16540..17657,17889..18034,18191..18365))] [gbkey=CDS]
Sequence

ATGGACATTATTAAAGTTGTTTTATTTTTGATTTTGAGAAATCAAAATTTCAATTTTTCT
CCCGAATTTGTCGATGGACTCCGGTCAAAGTGTCCGAAGTCAGTTGACCGAATCCGGGAT
GTATCCCGTATCTGGATGGGGACGGCACCAAAATCGAAGAGTCGATGCAACTTAGCCTTG
GGAATATTTGTCTTCTCCGGCATTATACTGCTGCCTGTACTTCTACCAGTTGCTTCAACT
GATCATAGTATCAAGGCGGCCAATACCACCAGCAAGGGGACTTTCAATGAACTTGATAGG
TTATCTATGGGACAAGTCGGCAATTCAGGCCCGCGGTTGTGGGCATTTATAGTTGCAACA
TATTGGGTTTCTGTTGTTACTTACTACCTTTTATGGAAAGCATACAAACATGTTTCAGAA
TTGAGAGCTAAAGCTCTTATGTCTCCAGAAATCAGAGCCGATCAATTTGTTATTCTTGTC
AGGGATATTCCTCCTGCTGCTGTTGGTCAAAGTAAAAAAGAGCAGATAGATTCATTCTTT
AGAGCAATCTACCCCGACACATTTTATCGGTCAATGGTGGTGACGAACAATAAGGAGGTA
AACAAAATTTATGAAGAGTTGGAAGGGTACAAAAAGAAGCTTGCACGTGCTGAAGCTATC
TATGAGGAGTCGAAGAAAACTAATCCTGATGCACTAAAACCCTCGCATAAAACTGGTTTC
CTTGGTATTGTTGGTGAAAAGGTAGATTCAATTGAATTCTACAATGATAAGATTAAGGAG
TTGATCCAACAGTTGGAAGTTGAACAAAAGTTGACTCTCAAAGAGAAACAGCAATCTTCT
GCGCTCGTCTTTTTCAACAAAAGGGTGGCTGCAGCTTCTGCATCACAGAATTTACACGCC
CCTATAGTTGACAGGTGGACCGTTATAGACGCCCCAGAACCACGGCAGTTGATTTGGACT
AATCTTCCAAAAACGTTTTATGAGAGAATAATCCGGCAGTATGTTGTGTACGTTGTTGTG
TTCCTGACCATATTCTTTTACATGATTCCGATTGGATTCATCTCTGCATTAACAACTCTA
GACAATCTGGTGAAGCTTCTCCCGTTTTTGAAACCGGTAGTTAATCAGAAGGCAATCAAA
ACAGTGCTAGAAGCATATTTGCCTCAACTTGCACTCATCATATTTTTGGCTTTGTTGCCA
AAGTTTCTTATGTTTCTATCCAAAGCAGAGGGCATCCCTTCAGAAAGCCATGTGACAAGA
GCTGCTTCAGGGAAATATTTTTATTTCTCAGTGCTTAATGTATTTATTGGTGTTACTCTC
GGTGGAACTCTATTCAGTTCCTTCAAGAGCATTGAGAACGATCCCAACTCTATTTTTCGT
GTATTGGCAGAAAGCCTTCCACAGAATGCAACTTTCTTCTTGACCTTTGTCGCTTTGAAG
TTCTTTGTCGGCTATGGGCTGGAGCTGTCCAGAATAGTTCCTCTAATCATATTCCATCTC
AAGAAGAAGTATCTGTGCAAAATTGAAGCTGAGATAAAAGAGGCTTGGGCTCCTGGCGAT
CTAGGCTATGCAACTCGATTTCCCAGTGATATGCTGATTATGACGATTGTCCTATGCTAT
TCCGTCATAGCTCCCATAATTTTACCGTTTGGAGTGGTTTACTTCGGTCTTGGCTGGCTT
CTACTACGGAATCAGGCACTGAAAGTGTACGTTCCTTCATTCGAGAGCTACGGAAGAATG
TGGCCCCATATTCACACGCGGATGTTAGCTACCTTGATTTTGTATCAAGTTACCATGTGC
GGTTACTTTGGAGTTAAAAAGTTCGCGCCTACTCCAGTTTTGTTTCCACTTCCAATATTC
TCCTTGATCTTCGCGTTCATTTGTCAGAAGAAATTCCGTCGGTTCTTTGTATCTCCAGCC
CTCGAAGTCATTTCCCACGAACTAAAAGAAGTCCCGAACATGGATATTGTCTTCAGATCT
TTTATTCCACCATGCTTGAGTGCAGGGAAGTCCGATGACCATCAGTTTGAGGACGCGTTA
TCTCATGTGTCTAAAACAGGTTCCTCTTCAGTATGA

Peptide Sequence

PEP ID

XP_016464415.1
PEP Infomation

PREDICTED: CSC1-like protein ERD4 isoform X2 [Nicotiana tabacum]
Sequence

MDIIKVVLFLILRNQNFNFSPEFVDGLRSKCPKSVDRIRDVSRIWMGTAPKSKSRCNLAL
GIFVFSGIILLPVLLPVASTDHSIKAANTTSKGTFNELDRLSMGQVGNSGPRLWAFIVAT
YWVSVVTYYLLWKAYKHVSELRAKALMSPEIRADQFVILVRDIPPAAVGQSKKEQIDSFF
RAIYPDTFYRSMVVTNNKEVNKIYEELEGYKKKLARAEAIYEESKKTNPDALKPSHKTGF
LGIVGEKVDSIEFYNDKIKELIQQLEVEQKLTLKEKQQSSALVFFNKRVAAASASQNLHA
PIVDRWTVIDAPEPRQLIWTNLPKTFYERIIRQYVVYVVVFLTIFFYMIPIGFISALTTL
DNLVKLLPFLKPVVNQKAIKTVLEAYLPQLALIIFLALLPKFLMFLSKAEGIPSESHVTR
AASGKYFYFSVLNVFIGVTLGGTLFSSFKSIENDPNSIFRVLAESLPQNATFFLTFVALK
FFVGYGLELSRIVPLIIFHLKKKYLCKIEAEIKEAWAPGDLGYATRFPSDMLIMTIVLCY
SVIAPIILPFGVVYFGLGWLLLRNQALKVYVPSFESYGRMWPHIHTRMLATLILYQVTMC
GYFGVKKFAPTPVLFPLPIFSLIFAFICQKKFRRFFVSPALEVISHELKEVPNMDIVFRS
FIPPCLSAGKSDDHQFEDALSHVSKTGSSSV

Transcript Sequence

Gene sequence data has not been registered.